Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015805325.1_cds_XP_016493098.1_8324
CDS Infomation

[gene=LOC107812484] [db_xref=GeneID:107812484] [protein=uncharacterized protein At4g04980-like] [protein_id=XP_016493098.1] [location=complement(join(19066..19245,19332..19484,19565..19729,19835..20000,20103..21315,21486..21609,21717..21812,22361..22582,23398..23664))] [gbkey=CDS]
Sequence

ATGTTTTTCATCATTTTCATCCTCCGTTATTTGAATTTTATATATTCTATTATTGTTGCT
GTTTACCGATTTGAATTTCTCTCACTGTTTCTAATTGTCAAAATCAATAGGAAAATTGAC
TTGCTACAATCATCATTTTCTTTATTGTTGTTGCCTTTTTCTTCAAGCCTATTTAGAACT
TGTTATTATAATTGGTTGCAAATGCAATCTGGGGAATGCTGTGTTGTGGCTCCTCACTTT
TCCCCTAGTAAGCTCTCCACATTTGAGGATGATGATATGCAAGAGATAAATGTACTTACT
AAAGAAACCAAAAAAACACCTTCCATTATAGTATCGAAAGGTTATAGCACAACCAAAGGC
TCTAGAGTTCACAATTCATGTGGTGTAGCAGACAACTTCATAATAATGACAGCACTCAGG
AGCAAGATCCTCACCTTGAGAGACTTGCTTGATCTATCACCTTGTTTGGGTTCTGCATCT
GTAAATGAGCTGCTGATATTGACCCTAAAGGATCTCCATAAATTGTATCCTTCCATCAAC
CCAAATGTTCCATTGTCAAATATTGATGGAGCAGGAATGGATCAGGCACTGGAATGCTTT
TGTGATACTCTGAAATCAATCGGGGAAATGTGGACAGGTGATGATAAATTCATGGCGGAA
TTTAATGAGGACTCACACAGTAAACTCCACGACGATCTAAAGCGTTATGGATTGGTATTG
CTTGATGAGATGATTAAGCTAGCCACTGAAAGGGTGTTCGATATGATGGACGTGGATGAC
CAGACGAGAGATGAAAGTCCTTCATCCGATACCTTTGGGAGGCCTCTGTCAGAGTCTTAC
TCGAGCAACGAGTCCTCTCCCTCAAGCCCTCCACCTACCCCAACTTCTGTTCTCTCTGAG
ATAGTAATCAATGGTTCACAGAAGAGTGAACTCAAGGTTCAAGCAATTGAGAAGCTGAAT
CCTATCGATGTAAAACGCCTCTATTTCCACTTGCTGCCTCATGCAATAGAGCAAGATCAA
GGTTGTGTTGTTCAACTAGCAACTAACTTTAGTGAACAAATATCAGAAATACAAGCAGGG
GATGATTGTGAATTTGGCCAAGATTGTGACATGACGGACTCTCCAAATATTCTACTGACT
GTTATGGACAATGTATCAGAAAATAGAGGAACATGTTGCACTGGTGCTTCAAATAATCAA
CCAGTGTCAAGTCCTGTTTCATTGGACGTGCGTTTACCTCCATCTACGCTTCCTAAGTTG
AGATCATATGTAGCAGAACAGGCAGCAGCTCCACTATCACCATTTGCATTATCTCCAAAT
GTCATAGAATCACCACCAATGACATCAAGAAACAAAGTAACACCTCCACCTCCGTCTCCG
CCTCCACCCCCACCACGTCCCATGGCGGTGCCTCCACCGCCACCTAAGACAATAGGAAAT
GTAACAACAGTTCCACCACCACCTCCCATGACATCCGGAAATGTAATATCACCTCCACCT
CCACCACCACTTCCCATCAGATCAAAGGGTATCACACCTCTACTACCACCTAAGACAACA
GGAAGTGTAATATCACCTCCACCTCCACCACCACCTCCCATCGGATCAAAGGGTATGACA
CCTCCACCCCCACCTCCACCAATGGCTTCTAATGGAGCAGTGCCAGCGCCACCTCCACCC
ATGCCAATGGGAAAGGGACCTGCACCTCCACCACCACTAGGATTTATGGGTGTCTTACGA
GTTAAGAGAGCAGCCACTAAATTGAAAAGATCATCCCAAATGGGTAATCTTTATCGACTT
CTCAAGAGCCAAGTTGAAGGCTCTAGTTTAGATAGTAAATCACAGAAGAGAACAGGGAAA
GTTTGTGCTTCAGCAGGAGGTAAACAGGGAATGGCTGATGCATTAGCAGAAATGACAAAG
AGGTCAGCATATTTCCACCAAATTGAAGAGGATGTTGTAAATCATGCAAAAACAATCAAG
GAGATAAAAACGGCCATTGCTTCTTTTCAAACATCAAATATGTCCGAGCTCGTTAAGTTC
CACAAATATATAGAATCTCACCTTGAGAAATTAACCGATGAATGTCAGGTGCTAGCAAGA
TTTGAAGATTTTCCTACCAAAAAGTTGGAAGAACTTCGGATGGCAGCAGCATTATATTCC
AAGTTAGACTCAATAGACACTACTCTAAAGAATTGGCCAATAGTCTCACCTGTTGGCGAA
CTCCTTGACAAAGCTGAGAGTTACTTTAACAAGATCAAAGGAGAAATTGAAACACTGGAT
CGAACAAAAGATGAAGAGTCCAAGAAATTTACAAGCCATAACATTCATTTTGATTTTGGC
ATTATCGTGCGTATCAAGGAATTAATGGTAGATGTTTCCTCAAACTGCATGGAACTTGTC
TTGAAGGAGAGGAGAGAAGCAAAGACAAAAAATGATGGGCACAAAAAGCTAGGATCGAGT
AAACTACTATGGAAGGCCTTCCAATTTGCATTCAGAGTCTATACTTTTGCTGGTGGGCAA
GATGACCGCGCTGACAAGTTGACAAGGGAATTGGCTCAAGAAATCCAAACAAATCCTAAT
CAATAG

Peptide Sequence

PEP ID

XP_016493098.1
PEP Infomation

PREDICTED: uncharacterized protein At4g04980-like [Nicotiana tabacum]
Sequence

MFFIIFILRYLNFIYSIIVAVYRFEFLSLFLIVKINRKIDLLQSSFSLLLLPFSSSLFRT
CYYNWLQMQSGECCVVAPHFSPSKLSTFEDDDMQEINVLTKETKKTPSIIVSKGYSTTKG
SRVHNSCGVADNFIIMTALRSKILTLRDLLDLSPCLGSASVNELLILTLKDLHKLYPSIN
PNVPLSNIDGAGMDQALECFCDTLKSIGEMWTGDDKFMAEFNEDSHSKLHDDLKRYGLVL
LDEMIKLATERVFDMMDVDDQTRDESPSSDTFGRPLSESYSSNESSPSSPPPTPTSVLSE
IVINGSQKSELKVQAIEKLNPIDVKRLYFHLLPHAIEQDQGCVVQLATNFSEQISEIQAG
DDCEFGQDCDMTDSPNILLTVMDNVSENRGTCCTGASNNQPVSSPVSLDVRLPPSTLPKL
RSYVAEQAAAPLSPFALSPNVIESPPMTSRNKVTPPPPSPPPPPPRPMAVPPPPPKTIGN
VTTVPPPPPMTSGNVISPPPPPPLPIRSKGITPLLPPKTTGSVISPPPPPPPPIGSKGMT
PPPPPPPMASNGAVPAPPPPMPMGKGPAPPPPLGFMGVLRVKRAATKLKRSSQMGNLYRL
LKSQVEGSSLDSKSQKRTGKVCASAGGKQGMADALAEMTKRSAYFHQIEEDVVNHAKTIK
EIKTAIASFQTSNMSELVKFHKYIESHLEKLTDECQVLARFEDFPTKKLEELRMAAALYS
KLDSIDTTLKNWPIVSPVGELLDKAESYFNKIKGEIETLDRTKDEESKKFTSHNIHFDFG
IIVRIKELMVDVSSNCMELVLKERREAKTKNDGHKKLGSSKLLWKAFQFAFRVYTFAGGQ
DDRADKLTRELAQEIQTNPNQ

Transcript Sequence

Gene sequence data has not been registered.